standalone software

Java GUI version CRISPR-Local-java.zip
Linux command line version CRISPR-Local.tar.gz
Get the lasted source code on Github

database (built by RD-build.pl) of some genome for Cas9 (NGG) and Cpf1 (TTTN)

Genome source download (Cas9) download (Cpf1)
Aegilops tauschii (ASM34733v1) Ensembl Plants Cas9 Cpf1
Ananas comosus (v6) CoGe Cas9 Cpf1
Arabidopsis lyrata (v.1.0) Ensembl Plants Cas9 Cpf1
Arabidopsis thaliana (TAIR10) Ensembl Plants Cas9 Cpf1
Brachypodium distachyon (v1.0) Ensembl Plants Cas9 Cpf1
Brassica napus (AST_PRJEB5043_v1) Ensembl Plants Cas9 Cpf1
Brassica oleracea (v2.1) Ensembl Plants Cas9 Cpf1
Brassica rapa (IVFCAASv1) Ensembl Plants Cas9 Cpf1
Chlamydomonas reinhardtii (v3.1) Ensembl Plants Cas9 Cpf1
Citrus sinensis (v2.0) CsiDB Cas9 Cpf1
Cucumis melo (v3.5) MELONOMICS Cas9 Cpf1
Cucumis sativus phytozome v9.0 Cas9 Cpf1
Cyanidioschyzon merolae (ASM9120v1) Ensembl Plants Cas9 Cpf1
Glycine max (V1.0) Ensembl Plants Cas9 Cpf1
Gossypium hirsutum (v1.1) Cottongen Cas9 Cpf1
Hordeum vulgare (Hv_IBSC_PGSB_v2) Ensembl Plants Cas9 Cpf1
Lentinula edodes (W1-26) Cas9 Cpf1
Lotus japonicus (v3.0) Miyakogusa v3.0 Cas9 Cpf1
Medicago truncatula (MedtrA17_4.0) Ensembl Plants Cas9 Cpf1
Musa acuminata (MA1) Ensembl Plants Cas9 Cpf1
Nicotiana benthamiana (v0.4.4) Sol Genomics Network (SGN) Cas9 Cpf1
Oryza brachyantha (v1.4b) Ensembl Plants Cas9 Cpf1
Oryza glaberrima (AGI1.1) Ensembl Plants Cas9 Cpf1
Oryza sativa subsp. indica Minghui 63 RIGW Cas9 Cpf1
Oryza sativa subsp. indica Zhenshan 97 RIGW Cas9 Cpf1
Oryza sativa (MSU-7.0) Rice Genome Annotation Project Cas9 Cpf1
Oryza sativa Indica (ASM465v1) Ensembl Plants Cas9 Cpf1
Oryza sativa Japonica (IRGSP-1.0) Ensembl Plants Cas9 Cpf1
Physcomitrella patens (ASM242v1) Ensembl Plants Cas9 Cpf1
Populus trichocarpa (JGI2.0) Ensembl Plants Cas9 Cpf1
Selaginella moellendorffii (v1.0) Ensembl Plants Cas9 Cpf1
Setaria italica (JGIv2.0) Ensembl Plants Cas9 Cpf1
Setaria viridis (v1.0) JGI Cas9 Cpf1
Solanum lycopersicum (SL2.50) Ensembl Plants Cas9 Cpf1
Solanum tuberosum (SolTub_3.0) Ensembl Plants Cas9 Cpf1
Sorghum bicolor (v2) Ensembl Plants Cas9 Cpf1
Triticum aestivum (TGACv1) Ensembl Plants Cas9 Cpf1
Triticum urartu (ASM34745v1) Ensembl Plants Cas9 Cpf1
Vitis vinifera (IGGP_12x) Ensembl Plants Cas9 Cpf1
Zea mays (AGPv3) Ensembl Plants Cas9 Cpf1
Zea mays (AGPv4) Ensembl Plants Cas9 Cpf1